Nomenclature Codes

Information about Nomenclature Codes

The Nomenclature Codes (or "the Codes of nomenclature") are the rulebooks that govern biological nomenclature.

After the successful introduction of two-part names for species by Linnaeus it became ever more apparent that a detailed body of rules was necessary to govern scientific names. From the mid-nineteenth century onwards there were several initiatives to arrive at worldwide-accepted sets of rules. In the course of time these became the present Nomenclature Codes governing the naming of

Differences between Codes

Starting point

The starting point, that is the time from which these Codes are in effect (usually retroactively), varies from group to group, and sometimes from rank to rank. In botany the starting point will often be 1753, in zoology 1758. On the other hand bacteriology started anew, making a clean sweep in 1980, although maintaining the original authors and dates of publication.

Workings

There are also differences in the way Codes work. For example, the ICBN (the plant Code) forbids tautonyms, while the ICZN, (the animal Code) allows them.

Terminology

These Codes differ in terminology, and there is a long-term project to "harmonize" this. For instance, the ICBN uses "valid" in "valid publication of a name" (= the act of publishing a formal name), with "establishing a name" as the ICZN equivalent. The ICZN uses "valid" in "valid name" (="correct name"), with "correct name" as the ICBN equivalent. Harmonization is making very limited progress.

Types

The codes differ in terms of what kinds of types are permissible. The bacteriological code generally requires living type cultures. The botanical code requires dried specimens (typically in an herbarium), or sometimes drawings. There has been ongoing debate regarding which kind of type is more useful in a case like cyanobacteria.[1] The zoological code generally requires a dead preserved animal, but sometimes allows a living type.[2]

Other codes

A more radical approach is to replace all existing Codes by a BioCode, basically a synthesis of the existing Codes. [3][4] The BioCode draft has received little attention since 1997; its originally planned implementation date of January 1, 2000, has passed unnoticed. However, a 2004 paper concerning the cyanobacteria does advocate a future adoption of a BioCode and interim steps consisting of reducing the differences between the codes.[1]

Another code in development is the PhyloCode, which regulates phylogenetic nomenclature rather than Linnaean nomenclature (that is, it requires phylogenetic definitions for every name, and does not contain mandatory ranks). Implementation is tentatively scheduled for sometime before 2010.

The formal names of cultivated plants are governed by the ICNCP. This code operates within the limits set by the ICBN, but uses different basic principles.

See also

References

1. ^ Ahoren Oren (2004). "A proposal for further integration of the cyanobacteria under the Bacteriological Code". Int. J. Syst. Evol. Microbiol. 54: 1895-1902. DOI:10.1099/ijs.0.03008-0. 
2. ^ International Code of Zoological Nomenclature, Fourth Edition (1999), article 72.5
3. ^ Draft BioCode (1997).
4. ^ John McNeill (1996-11-04). "The BioCode: Integrated biological nomenclature for the 21st century?". Proceedings of a Mini-Symposium on Biological Nomenclature in the 21st Century. 

External links

Carolus Linnaeus (Carl von Linné)

Carl von Linné, Alexander Roslin, 1775. Currently owned by and hanging at the Royal Swedish Academy of Sciences.
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The International Commission on Zoological Nomenclature (ICZN) is an organization dedicated to "achieving stability and sense in the scientific naming of animals". Founded in 1895, it currently comprises 28 members from 20 countries, mainly practicing zoological taxonomists.
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Plantae
Haeckel, 1866[1]

Divisions

Green algae
  • Chlorophyta
  • Charophyta
Land plants (embryophytes)
  • Non-vascular land plants (bryophytes)

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Eukarya
Whittaker & Margulis, 1978
(unranked) Opisthokonta

Kingdom: Fungi
(L., 1753) R.T. Moore, 1980[1]

Subkingdom/Phyla

Chytridiomycota
Blastocladiomycota

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Cyanobacteria

Orders

The taxonomy is currently under revision.[1]

Cyanobacteria (Greek: κυανόs (kyanós) = blue + bacterium) also known as Cyanophyta
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The International Code of Botanical Nomenclature (ICBN) is the set of rules and recommendations dealing with the formal botanical names that are given to plants.
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Bacteria

Phyla

Actinobacteria
Aquificae
Chlamydiae
Bacteroidetes/Chlorobi
Chloroflexi
Chrysiogenetes
Cyanobacteria
Deferribacteres
Deinococcus-Thermus
Dictyoglomi
Fibrobacteres/Acidobacteria
Firmicutes
Fusobacteria
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The International Code of Nomenclature of Bacteria (ICNB) governs the scientific names for bacteria. As such it is one of the Nomenclature Codes. Originally the botanical Code dealt with bacteria, and this kept references to bacteria until 1975.
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Virus classification involves naming and placing viruses into a taxonomic system. Like the relatively consistent classification systems seen for cellular organisms, virus classification is the subject of ongoing debate and proposals.
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Botany is the scientific study of plant life. As a branch of biology, it is also called plant science(s), phytology, or plant biology. Botany covers a wide range of scientific disciplines that study plants, algae, and fungi including: structure, growth,
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Zoology (from Greek: ζῴον, zoion, "animal"; and λόγος, logos, "knowledge") is the biological discipline which involves the study of animals.
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Microbiology is the study of microorganisms, which are unicellular or cell-cluster microscopic organisms.[1] This includes eukaryotes such as fungi and protists, and prokaryotes such as bacteria and certain algae.
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A tautonym is a binomial scientific name in which the name of the genus and that of the species (referred to as the specific epithet in the International Code of Botanical Nomenclature and the specific name
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In biology, a type is that which fixes a name to a taxon. Depending on the nomenclature code which is applied to the organism in question, a type may be a specimen, culture, illustration, description or taxon.
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In botany, a herbarium is a collection of preserved plant specimens. These specimens may be whole plants or plant parts: these will usually be in a dried form, mounted on a sheet, but depending upon the material may also be kept in alcohol or other preservative.
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Cyanobacteria

Orders

The taxonomy is currently under revision.[1]

Cyanobacteria (Greek: κυανόs (kyanós) = blue + bacterium) also known as Cyanophyta
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Cyanobacteria

Orders

The taxonomy is currently under revision.[1]

Cyanobacteria (Greek: κυανόs (kyanós) = blue + bacterium) also known as Cyanophyta
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The International Code of Phylogenetic Nomenclature, known for short as the PhyloCode, is a developing draft for a formal set of rules governing phylogenetic nomenclature.
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Phylogenetic nomenclature is an alternative to rank-based nomenclature. Its two defining features are the use of phylogenetic definitions of biological taxon names, and the lack of obligatory ranks.
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Scientific classification or biological classification is a method by which biologists group and categorize species of organisms. Scientific classification also can be called scientific taxonomy, but should be distinguished from folk taxonomy, which lacks scientific basis.
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Phylogenetic nomenclature is an alternative to rank-based nomenclature. Its two defining features are the use of phylogenetic definitions of biological taxon names, and the lack of obligatory ranks.
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In botanical nomenclature, a taxon is usually assigned to a rank in a hierarchy. The basic rank is that of species, and if an organism is named it most often will receive a species name.
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In zoology, a taxon is usually assigned to a rank in a hierarchy. The ICZN divides names in "family-group names", "genus group-names" and "species-group names". The ICZN explicitly mentions:


- - - superfamily

family
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digital object identifier (or DOI) is a permanent identifier given to a document, which is not related to its current location. A typical use of a DOI is to give a scientific paper or article a unique identifying number that can be used by anyone to locate details of the paper, and
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